The detailed information of tRNA gene sequence


Sequence ID>WENV170970827
Genome IDMTKX01000081
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 32935
End posion on genome 32851
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcggacggt
tRNA gene sequence 
GGAGGACTAGTCTAACGGTAAGGCAGCGGACTTGAAATCCGCCGGGTTTAGGCCCATCGG
GGTTCGAATCCCCGGTCCTCCGCCA
Downstream region at tRNA end position 
gtttatggtg
Secondary structure (Cloverleaf model)
>WENV170970827	Ser	TGA
                   t      GCCA gtttatggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     G C C C C     A
        A A        A      | | | | |     G
      C     T C T G       C G G G G     C
      G     | | + |                 T T
      G     A G G C
        T A        A     CGGGTTTAGGCCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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