The detailed information of tRNA gene sequence


Sequence ID>WENV170970833
Genome IDMTKX01000090
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6403
End posion on genome 6311
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggacggag
tRNA gene sequence 
GGAGAGATGCAGGAGTGGCTTAACTGGCACGCCTGGAAAGCGTGTGTCCCGCTAGAAGCG
GGACCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
tgacaaagac
Secondary structure (Cloverleaf model)
>WENV170970833	Ser	GGA
                   g      GCAA tgacaaagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    C       A C T G
      T T A        G     TGTCCCGCTAGAAGCGGGACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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