The detailed information of tRNA gene sequence


Sequence ID>WENV170970836
Genome IDMTKX01000104
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 58484
End posion on genome 58571
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcatgaaaac
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGACCCGCAAGGGTCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaaaca
Secondary structure (Cloverleaf model)
>WENV170970836	Ser	TGA
                   c      GCCA caaaaaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACCCGCAAGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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