The detailed information of tRNA gene sequence


Sequence ID>WENV170970837
Genome IDMTKX01000104
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 103879
End posion on genome 103795
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cgcgcaaatt
tRNA gene sequence 
GCCCAGGTGGTGGAATTGGTAGACACGCCACTTTGAGGGGGTGGTGCCGGTTGCGGTGTG
CAAGTTCGAGTCTTGTCCTGGGCACgt
Downstream region at tRNA end position 
agataccaaa
Secondary structure (Cloverleaf model)
>WENV170970837	Leu	GAG
                   t      ACgt agataccaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T G T T C     A
      T A A        G      + | | | |     G
    T       G G T G       G C A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCGGTTGCGGTGT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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