The detailed information of tRNA gene sequence


Sequence ID>WENV170970842
Genome IDMTKX01000117
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 88870
End posion on genome 88796
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acatgttaac
tRNA gene sequence 
GGTCGGTTCATCTAAGGGTTAGGATTCAAGATTTTCATTCTTGCCATAGGGGTTCGAATC
CCCTACCGACTGCAA
Downstream region at tRNA end position 
cttttaacag
Secondary structure (Cloverleaf model)
>WENV170970842	Glu	TTC
                   c      GCAA cttttaacag
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
      G A A        C      | | | | |     G
    G       T C T A       A G G G G     C
    G       + | | |                 T T
    T       G G A T
      T A          T     CCAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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