The detailed information of tRNA gene sequence


Sequence ID>WENV170970844
Genome IDMTKX01000127
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 36595
End posion on genome 36684
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagccagtcc
tRNA gene sequence 
GGAGAGATGCCAGAGTGGACGATTGGGGCGGTCTCGAAAACCGTTGTCCGGGTAACCGGA
CCGGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
taaagggtgt
Secondary structure (Cloverleaf model)
>WENV170970844	Ser	CGA
                   c      GCAA taaagggtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTCCGGGTAACCGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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