The detailed information of tRNA gene sequence


Sequence ID>WENV170970855
Genome IDMTKX01000219
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 80290
End posion on genome 80215
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gtgcgctctg
tRNA gene sequence 
GTGGGAGTAGTTCAGTTGGTAGAGCCCTTGACTGTGGATCAAGTGGTCGCCGGTTCGACC
CCGGTCTCCCACCCCA
Downstream region at tRNA end position 
gatttttgcg
Secondary structure (Cloverleaf model)
>WENV170970855	His	GTG
                   g      CCCA gatttttgcg
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C C
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C C G G     C
    G       | | + |                 T T
    G       G A G C
      T A          C     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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