The detailed information of tRNA gene sequence


Sequence ID>WENV170970863
Genome IDMTKX01000249
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 47181
End posion on genome 47106
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accggtaaaa
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGCAGAGCGACGGCTTTGCAAGCCGTAGGTCGCCGGTTCGAGC
CCGGCCATCTCCACCA
Downstream region at tRNA end position 
gaagagcgag
Secondary structure (Cloverleaf model)
>WENV170970863	Ala	TGC
                   a      ACCA gaagagcgag
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C G
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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