The detailed information of tRNA gene sequence


Sequence ID>WENV170970866
Genome IDMTKX01000257
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 62190
End posion on genome 62268
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
catcgctttT
tRNA gene sequence 
GGTGTGGTAGTTCAGTTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGA
GTCCCGTCCGCACCGCCC
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170970866	Asp	GTC
                   T      GCCC nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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