The detailed information of tRNA gene sequence


Sequence ID>WENV170970880
Genome IDMTKX01000302
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 32436
End posion on genome 32512
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcggccag
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGCTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
gagtttcaac
Secondary structure (Cloverleaf model)
>WENV170970880	Met	CAT
                   g      ACCA gagtttcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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