The detailed information of tRNA gene sequence


Sequence ID>WENV170970898
Genome IDMTKX01000399
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 120729
End posion on genome 120816
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggatgcaaag
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGTCCGGGCGACTGGA
CCGGGGGTTCGAATCCCTCTTTCTCCGCag
Downstream region at tRNA end position 
accgtagcac
Secondary structure (Cloverleaf model)
>WENV170970898	Ser	TGA
                   g      GCag accgtagcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTCCGGGCGACTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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