The detailed information of tRNA gene sequence


Sequence ID>WENV170970908
Genome IDMTKX01000453
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 25901
End posion on genome 25828
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cacaatgcac
tRNA gene sequence 
CGGGGTGTGGCGCAGTTGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGCTGGTTCGAGT
CCAGTCACCCCGACtt
Downstream region at tRNA end position 
atcatccttc
Secondary structure (Cloverleaf model)
>WENV170970908	Pro	CGG
                   c      ACtt atcatccttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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