The detailed information of tRNA gene sequence


Sequence ID>WENV170970915
Genome IDMTKX01000494
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 25406
End posion on genome 25329
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgcaaacggt
tRNA gene sequence 
GGTCCGGTAGTTCAATTTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGA
GTCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
gtctttccct
Secondary structure (Cloverleaf model)
>WENV170970915	Asp	GTC
                   t      GCCA gtctttccct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | + |                 T T
  G         G A G C
    T T A          A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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