The detailed information of tRNA gene sequence


Sequence ID>WENV170970918
Genome IDMTKX01000511
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 44533
End posion on genome 44625
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accatcatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGAAGGCAACCGCCTGCTAAGCGGTTGATGGGCTTAACACC
TATCCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cttcctttcc
Secondary structure (Cloverleaf model)
>WENV170970918	Ser	GCT
                   c      GCCA cttcctttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGATGGGCTTAACACCTATCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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