The detailed information of tRNA gene sequence


Sequence ID>WENV170970920
Genome IDMTKX01000520
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5086
End posion on genome 5163
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actgcctttT
tRNA gene sequence 
GGGACAGTGGGGTAGCCTGGTCTATCCTCGAGGGTTTGGGACTCTTGGACCGCGGTTCGA
ATCCGCGCTGTCCCATCt
Downstream region at tRNA end position 
gcttttcttt
Secondary structure (Cloverleaf model)
>WENV170970920	Pro	TGG
                   T      ATCt gcttttcttt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        G      | | | | |     G
  T         T G G G       C G C G G     C
  G           | | +                 T T
  G         T C C T
    T C T A        C     GGAC
                    G + T
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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