The detailed information of tRNA gene sequence


Sequence ID>WENV170970923
Genome IDMTKX01000537
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10780
End posion on genome 10855
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cttctttgtt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCCGGCTAGCGCGCTTGCATGGGGTGCAAGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
tttaccgcag
Secondary structure (Cloverleaf model)
>WENV170970923	Pro	GGG
                   t      ACtt tttaccgcag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        G      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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