The detailed information of tRNA gene sequence


Sequence ID>WENV170970927
Genome IDMTKX01000579
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5051
End posion on genome 5143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcatacac
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGCTGAACGGGATCGCCTGCTAAGTGATTGTCGGGCTTTAAACT
CGACCGGGGGTTCGAATCCCCCCCTCCCCGCCA
Downstream region at tRNA end position 
taggaataaa
Secondary structure (Cloverleaf model)
>WENV170970927	Ser	GCT
                   c      GCCA taggaataaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TGTCGGGCTTTAAACTCGACC
                    A - T
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK