The detailed information of tRNA gene sequence


Sequence ID>WENV170970930
Genome IDMTKX01000586
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 42583
End posion on genome 42672
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctcctttc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGATAGCGGCGGTCTTGAAAACCGTTGTCCCTTTGCGGGGA
CCGGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
aaaattcaga
Secondary structure (Cloverleaf model)
>WENV170970930	Ser	TGA
                   c      GCAA aaaattcaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        G     TGTCCCTTTGCGGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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