The detailed information of tRNA gene sequence


Sequence ID>WENV170970933
Genome IDMTKX01000618
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 162632
End posion on genome 162726
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcagccctc
tRNA gene sequence 
GGGAGGGTGAGGCATCCGGTGATGTCTCCGGACTTCAAATCCGGTATGGGGCTATAAACG
TCCCGGATGGGTTCGACTCCCATACCTTCCCGCCA
Downstream region at tRNA end position 
ctccgccgat
Secondary structure (Cloverleaf model)
>WENV170970933	SeC(p)	TCA
                   c      GCCA ctccgccgat
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C C T        A      | | | | |     G
    G       A C G G       A T G G G     C
    G       | | + |                 T T
    T       T G T C
      G A          T     TATGGGGCTATAAACGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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