The detailed information of tRNA gene sequence


Sequence ID>WENV170970934
Genome IDMTKX01000625
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 26076
End posion on genome 25979
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attcttccgc
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atattatcat
Secondary structure (Cloverleaf model)
>WENV170970934	SeC(p)	TCA
                   c      GCCA atattatcat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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