The detailed information of tRNA gene sequence


Sequence ID>WENV170970939
Genome IDMTKX01000642
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7565
End posion on genome 7492
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattcgcgtt
tRNA gene sequence 
GGTCGGTTGGCCGAGTGGCTAGGCATCGGTCTGCAAAACCGGGTACGGCGGTTCGAATCC
GCCACCGACCTCAA
Downstream region at tRNA end position 
ccccattaaa
Secondary structure (Cloverleaf model)
>WENV170970939	Cys	GCA
                   t      TCAA ccccattaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     GTAC
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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