The detailed information of tRNA gene sequence


Sequence ID>WENV170970944
Genome IDMTKX01000703
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1220
End posion on genome 1308
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcatttctgT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAGGGCGCAGGCCTGGAAAGCCTGTGGGGCGTCCAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTtc
Downstream region at tRNA end position 
tcatgatccn
Secondary structure (Cloverleaf model)
>WENV170970944	Ser	GGA
                   T      GTtc tcatgatccn
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       + | + |                 T T
    G       G G G C
      G T A        G     TGGGGCGTCCAGCCCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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