The detailed information of tRNA gene sequence


Sequence ID>WENV170970953
Genome IDMTKX01000732
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1625
End posion on genome 1698
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtgccaacac
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGAAGAGCGCCGCCTTTGCAAGGCGGAGGCCATGGGTTCAAAT
CCCATTGAGTCCACtt
Downstream region at tRNA end position 
tcgatgcacc
Secondary structure (Cloverleaf model)
>WENV170970953	Ala	TGC
                   c      ACtt tcgatgcacc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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