The detailed information of tRNA gene sequence


Sequence ID>WENV170970961
Genome IDMTKX01000780
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 48286
End posion on genome 48211
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgcaggctgt
tRNA gene sequence 
GGGCGGTTAGCTCAGCTGGGAGAGCGCGGCGTTCGCAACGCTGAGGTCGGGAGTTCGAAT
CTCCTACCGTCCACCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV170970961	Ala	CGC
                   t      ACCA tttttttatc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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