The detailed information of tRNA gene sequence


Sequence ID>WENV170970977
Genome IDMTKX01000826
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3183
End posion on genome 3259
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attagcacaa
tRNA gene sequence 
GGGCGGTTAGCTCAGGTGGTTAGAGCGCTGGTCTCACATACCAGAGGTCGTAGGTTCGAA
TCCTATACTGCCCACCA
Downstream region at tRNA end position 
tctttgtttt
Secondary structure (Cloverleaf model)
>WENV170970977	Val	CAC
                   a      ACCA tctttgtttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          T A
                    T     T A T C C     A
      G G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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