The detailed information of tRNA gene sequence


Sequence ID>WENV170970990
Genome IDMTKX01000878
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27612
End posion on genome 27697
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaaaatcc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGTTGACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gaaaaaatga
Secondary structure (Cloverleaf model)
>WENV170970990	Ser	TGA
                   c      GCCA gaaaaaatga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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