The detailed information of tRNA gene sequence


Sequence ID>WENV170971004
Genome IDMTKX01000935
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 46894
End posion on genome 46819
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtccctctgc
tRNA gene sequence 
GGCGCTATCGTCTAGAGGCCCAGGACAGGTGGTTCTCAGCCATCAGACCGGGGTTCGAAT
CCCCGTAGCGCTGCCA
Downstream region at tRNA end position 
tcgattctcc
Secondary structure (Cloverleaf model)
>WENV170971004	Glu	CTC
                   c      GCCA tcgattctcc
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGAC
                    G - C
                    G + T
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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