The detailed information of tRNA gene sequence


Sequence ID>WENV170971005
Genome IDMTKX01000943
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 170532
End posion on genome 170621
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaaaatgaac
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGAACCCATTTGGGTT
CCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttccaaaaa
Secondary structure (Cloverleaf model)
>WENV170971005	Ser	CGA
                   c      GCCA gttccaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAACCCATTTGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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