The detailed information of tRNA gene sequence


Sequence ID>WENV170971018
Genome IDMTKX01001011
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19119
End posion on genome 19030
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaaggttt
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTGAAACCATCAGTTTGCTAAACTGACGTACTCGCAAGGGTA
CCGGGGGTTCGAATCCCCCCCTCACCGCCA
Downstream region at tRNA end position 
aagaaaaaac
Secondary structure (Cloverleaf model)
>WENV170971018	Ser	GCT
                   t      GCCA aagaaaaaac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGCAAGGGTACC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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