The detailed information of tRNA gene sequence


Sequence ID>WENV170971026
Genome IDMTKX01001052
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 363
End posion on genome 290
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaggttaaaa
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGTACTACGTTCGGGACGTAGGGGCCGGAAGTTCGAGT
CTTCTCACCCCGACtg
Downstream region at tRNA end position 
agtaaatctg
Secondary structure (Cloverleaf model)
>WENV170971026	Pro	CGG
                   a      ACtg agtaaatctg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T G A        A      + | | | |     G
    T       C G C G       G G A A G     C
    G       | | | +                 T T
    G       G C G T
      T A          A     GGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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