The detailed information of tRNA gene sequence


Sequence ID>WENV170971047
Genome IDMTKX01001201
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 177111
End posion on genome 177185
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctccgttg
tRNA gene sequence 
GGGCCCATAGCTCAGTAGGTTAGAGCATCTGACTCATAATCAGGGGGTCGCTGGTTCAAG
CCCAGCTGGGCCCACtc
Downstream region at tRNA end position 
tacaaaagaa
Secondary structure (Cloverleaf model)
>WENV170971047	Met	CAT
                   g      ACtc tacaaaagaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    A       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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