The detailed information of tRNA gene sequence


Sequence ID>WENV170971055
Genome IDMTKX01001266
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3213
End posion on genome 3123
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaacgcac
tRNA gene sequence 
GGAGAGATGCCAGAGCGGTTGAATGGGACGGTCTCGAAAACCGTTGTAGTCCTTGTGGCT
ACCGTGGGTTCGAATCCCACTCTCTCCGCCT
Downstream region at tRNA end position 
aggaaaagat
Secondary structure (Cloverleaf model)
>WENV170971055	Ser	CGA
                   c      GCCT aggaaaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTAGTCCTTGTGGCTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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