The detailed information of tRNA gene sequence


Sequence ID>WENV170971059
Genome IDMTKX01001289
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12911
End posion on genome 12984
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aagcaaaaaa
tRNA gene sequence 
GAGCGATTAGCTCAGCTGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCGCGCGTTCAAA
TCGCGCATCGCTCAgag
Downstream region at tRNA end position 
aaaaaccttt
Secondary structure (Cloverleaf model)
>WENV170971059	Arg	CCG
                   a      Agag aaaaaccttt
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C G C G C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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