The detailed information of tRNA gene sequence


Sequence ID>WENV170971065
Genome IDMTKX01001317
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 666
End posion on genome 580
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ctttgaggat
tRNA gene sequence 
GCCGAAGTGGTGGAACTGGCAGACACACCATCTTGAGGGGGTGGCGCTCTACGGGGCGTG
CGGGTTCAAGTCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
ttatttcaag
Secondary structure (Cloverleaf model)
>WENV170971065	Leu	GAG
                   t      ACCA ttatttcaag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        A     CGCTCTACGGGGCGT
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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