The detailed information of tRNA gene sequence


Sequence ID>WENV170971067
Genome IDMTKX01001339
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11809
End posion on genome 11735
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gtcaaatcac
tRNA gene sequence 
GGGCTTGTAGCTTAGTTCGGAAGAGCGACGGACTCTTAATCCGTAGGTCAAGGGTTCAAA
TCCCTTCAGGCCCGCtg
Downstream region at tRNA end position 
ttttcccgat
Secondary structure (Cloverleaf model)
>WENV170971067	Lys	CTT
                   c      GCtg ttttcccgat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C       + | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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