The detailed information of tRNA gene sequence


Sequence ID>WENV170971068
Genome IDMTKX01001340
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3504
End posion on genome 3577
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgaaatgtc
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCTGCGGACTCATAATCCGTAGGTCGCTGGTTCAAG
TCCAGCAGGGCCCAaat
Downstream region at tRNA end position 
tcaaattgct
Secondary structure (Cloverleaf model)
>WENV170971068	Met	CAT
                   c      Aaat tcaaattgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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