The detailed information of tRNA gene sequence


Sequence ID>WENV170971069
Genome IDMTKX01001365
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3781
End posion on genome 3870
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttcatgcac
tRNA gene sequence 
GGAGAGGTAGCGCAGTCTGGCCTAACGCGCCCGCTTGGAAAGCGGGTATACCGCAAGGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
cactaaaccc
Secondary structure (Cloverleaf model)
>WENV170971069	Ser	GGA
                   c      GCCT cactaaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  T         C G C G       G T G G G     C
  G           | | |                 T T
  G         A C G C
    C C T A        G     TATACCGCAAGGTATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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