The detailed information of tRNA gene sequence


Sequence ID>WENV170971075
Genome IDMTKX01001376
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1018
End posion on genome 1093
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttgaaaag
tRNA gene sequence 
GGGCCTGTAGCGCAGTTGGGAGCGCGCCTCAATCGCACTGAGGAGGCCAGGGGTTCGAAT
CCCCTCAGGTCCACCT
Downstream region at tRNA end position 
ggggtggatc
Secondary structure (Cloverleaf model)
>WENV170971075	Ala	CGC
                   g      ACCT ggggtggatc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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