The detailed information of tRNA gene sequence


Sequence ID>WENV170971079
Genome IDMTKX01001385
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 37908
End posion on genome 37833
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgatgacacc
tRNA gene sequence 
GGCGCGGTACCCAAGAGGCTAAGGGAGAGGTCTGCAAAACCTTTATTCGTCGGTTCGAGT
CCGACCCGCGCCTCCA
Downstream region at tRNA end position 
ttttcccccg
Secondary structure (Cloverleaf model)
>WENV170971079	Cys	GCA
                   c      TCCA ttttcccccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C A G C C     A
      A G A        A      | | | | |     G
    G       A C C C       G T C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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