The detailed information of tRNA gene sequence


Sequence ID>WENV170971090
Genome IDMTKX01001491
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2681
End posion on genome 2756
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgatatttc
tRNA gene sequence 
GGGCCCATAGCTCAGATGGTTAGCAGCACCTGACTCATAATCAGGGGGTCGCTGGTTCGA
TTCCAGCTGGGCCCACtc
Downstream region at tRNA end position 
aaaacaaaga
Secondary structure (Cloverleaf model)
>WENV170971090	Met	CAT
                   c      ACtc aaaacaaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G A C C     A
    T A G A        A      | | | | |     G
  G         C T C G       G C T G G     C
  G           | | |                 T T
  T         C A G C
    T A G          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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