The detailed information of tRNA gene sequence


Sequence ID>WENV170971092
Genome IDMTKX01001505
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 43560
End posion on genome 43485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttctatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACAA
Downstream region at tRNA end position 
agaaagaggg
Secondary structure (Cloverleaf model)
>WENV170971092	Met	CAT
                   t      ACAA agaaagaggg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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