The detailed information of tRNA gene sequence


Sequence ID>WENV170971093
Genome IDMTKX01001517
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14226
End posion on genome 14302
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tactccatgc
tRNA gene sequence 
GCCGGGGTAGCTCAGTTGGTCAGAGCGCTGGATTGTGGATCCAGAGGTCCTGGGTTCGAC
CCCCAGCCCCGGTACCA
Downstream region at tRNA end position 
gttttaaaat
Secondary structure (Cloverleaf model)
>WENV170971093	His	GTG
                   c      ACCA gttttaaaat
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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