The detailed information of tRNA gene sequence


Sequence ID>WENV170971101
Genome IDMTKX01001618
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4239
End posion on genome 4154
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agatcaggaa
tRNA gene sequence 
GGGCAGATGGCGGAATTGGCAGACGCGCTAGGCTTAGGACCTAGTTCCTGATGAAGGAGT
GCGGGTTCGAGTCCCGCTCTGCCTACgg
Downstream region at tRNA end position 
acgtcccgcg
Secondary structure (Cloverleaf model)
>WENV170971101	Leu	TAG
                   a      ACgg acgtcccgcg
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCTGATGAAGGAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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