The detailed information of tRNA gene sequence


Sequence ID>WENV170971108
Genome IDMTKX01001727
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3026
End posion on genome 2950
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggagcgtgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCGCCGGTCTCCAAAACCGGATGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttattcctt
Secondary structure (Cloverleaf model)
>WENV170971108	Trp	CCA
                   c      GCCA tttattcctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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