The detailed information of tRNA gene sequence


Sequence ID>WENV170971112
Genome IDMTKX01001759
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3486
End posion on genome 3411
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcacgtattt
tRNA gene sequence 
GGACCAGTGGTGTAGCGGTTAACATGCCTCCCTGTCACGGAGGAGATCGCGGGTTCGATT
CCCGTCTGGTCCGCCA
Downstream region at tRNA end position 
tgtacgtggc
Secondary structure (Cloverleaf model)
>WENV170971112	Asp	GTC
                   t      GCCA tgtacgtggc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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