The detailed information of tRNA gene sequence


Sequence ID>WENV170971125
Genome IDMTKX01001860
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 31800
End posion on genome 31723
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccattcatgc
tRNA gene sequence 
GGGGTCGTAGTTAAGCCTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCGA
AGCTCGTCGACCCCGCCA
Downstream region at tRNA end position 
tttctttaaa
Secondary structure (Cloverleaf model)
>WENV170971125	Asp	GTC
                   c      GCCA tttctttaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          G A
                    T     T G C T C     A
    C C G A        A      + | | | |     G
  T         A T T G       G C G A G     C
  G         | | | |                 T T
  G         T A A C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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