The detailed information of tRNA gene sequence


Sequence ID>WENV170971132
Genome IDMTKX01001866
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39664
End posion on genome 39588
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttctttatat
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCGTTTGACTGGCAGTCAAAAGGTCAGGGGTTCGAT
TCCCCTAATCTCCACCT
Downstream region at tRNA end position 
ccgccctccg
Secondary structure (Cloverleaf model)
>WENV170971132	Ala	GGC
                   t      ACCT ccgccctccg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     T - A          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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