The detailed information of tRNA gene sequence


Sequence ID>WENV170971133
Genome IDMTKX01001866
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2960
End posion on genome 2876
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gactacaaaa
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGCTGGTCTCAAACACCAGTGGCAGCGATGCTGTG
CCGGTTCGATCCCGGCTCCGGGTACag
Downstream region at tRNA end position 
aaacggaaga
Secondary structure (Cloverleaf model)
>WENV170971133	Leu	CAA
                   a      ACag aaacggaaga
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCAGCGATGCTGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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