The detailed information of tRNA gene sequence


Sequence ID>WENV170971135
Genome IDMTKX01001870
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1894
End posion on genome 1971
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agattcccgt
tRNA gene sequence 
CGGGGTGTGGCGCAGTCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAAGTCGGAGGTTCGA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ttaaaaaacc
Secondary structure (Cloverleaf model)
>WENV170971135	Pro	TGG
                   t      ACCA ttaaaaaacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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