The detailed information of tRNA gene sequence


Sequence ID>WENV170971136
Genome IDMTKX01001881
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 80856
End posion on genome 80768
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaggattcc
tRNA gene sequence 
GGAGAGGTGTAGGAGTGGCTGAACTAGCACGCCTGGAAAGCGTGTGTTCCCCAAAAGGGA
ACCGGGGGTTCGAATCCCCCTCTCTCCGCtc
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV170971136	Ser	GGA
                   c      GCtc tttttaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A T       G G G G G     C
    G         | | |                 T T
    C       A C T A
      T G A        G     TGTTCCCCAAAAGGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK